Talk:Twilight's Kingdom - Part 2/@comment-24497037-20140405082905/@comment-7345250-20140405083955

I'm guessing the villain is in the chest. The chest was just a temporary means of containment, sort of like the Twilight in Legend of Zelda: Twilight Princess. It held Ganondorf because the Sages were unable to kill the dark king. Likewise, the chest may be holding the villain back until a certain group of harmonious friends can defeat it once and for all.